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Biochemistry - C785 Module 2 Study Guide

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Biochemistry - C785 Module 2 carboxyl group Correct Answer: A -COOH group, found in organic acids. amino group Correct Answer: a chemical group consisting of a nitrogen atom bonded to two hydrogen atoms Where are the hydrophobic amino acids found in the protein? Correct Answer: found in the interior of the protein What kind of bond connects a positively charged group and a negatively charged group? Correct Answer: ionic bond What type of reaction forms a peptide bond? Correct Answer: dehydration synthesis What type of reactions breaks the peptide bond? Correct Answer: Hydrolysis reaction Peptide bonds are in what structure? Correct Answer: Primary structure Hydrogen bonds hold which structure together? Correct Answer: Secondary and tertiary What amino acids are found on the exterior of the protein? Correct Answer: polar amino acids Two non-polar amino acids make what kind of interaction? Correct Answer: Hydrophobic interactions Non-covalent interactions between amino acid R groups Correct Answer: hydrophobic, ionic and hydrogen bonds What structure has a disulfide bond that holds together 2 subunits of an enzyme? Correct Answer: quaternary structure What structure has an Ionic interactions that hold together 4 different subunits of a protein? Correct Answer: quaternary structure What structure has an Ionic interactions that hold together 3 identical polypeptides Correct Answer: quaternary structure non polar amino acids Correct Answer: hydrophobic bond, weak strength, heat disrupts the interaction primary structure of protein Correct Answer: the amino acid sequence of the polypeptide chain secondary structure of protein Correct Answer: Hydrogen bonds are involved in this level of structure and the amino and carboxyl groups (backbone) form these bonds tertiary structure of protein Correct Answer: hydrogen, ionic and disulfide bonds as well as hydrophobic interactions quaternary structure of a protein Correct Answer: 2 or more polypeptides interact to form the protein Fate of misfolded proteins Correct Answer: aggregation, degradation and refolding

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Biochemistry - C785 Module 2
carboxyl group Correct Answer: A -COOH group, found in organic acids.

amino group Correct Answer: a chemical group consisting of a nitrogen atom bonded to two hydrogen
atoms

Where are the hydrophobic amino acids found in the protein? Correct Answer: found in the interior of
the protein

What kind of bond connects a positively charged group and a negatively charged group? Correct
Answer: ionic bond

What type of reaction forms a peptide bond? Correct Answer: dehydration synthesis

What type of reactions breaks the peptide bond? Correct Answer: Hydrolysis reaction

Peptide bonds are in what structure? Correct Answer: Primary structure

Hydrogen bonds hold which structure together? Correct Answer: Secondary and tertiary

What amino acids are found on the exterior of the protein? Correct Answer: polar amino acids

Two non-polar amino acids make what kind of interaction? Correct Answer: Hydrophobic interactions

Non-covalent interactions between amino acid R groups Correct Answer: hydrophobic, ionic and
hydrogen bonds

What structure has a disulfide bond that holds together 2 subunits of an enzyme? Correct Answer:
quaternary structure

What structure has an Ionic interactions that hold together 4 different subunits of a protein? Correct
Answer: quaternary structure

What structure has an Ionic interactions that hold together 3 identical polypeptides Correct Answer:
quaternary structure

non polar amino acids Correct Answer: hydrophobic bond, weak strength, heat disrupts the interaction

primary structure of protein Correct Answer: the amino acid sequence of the polypeptide chain

secondary structure of protein Correct Answer: Hydrogen bonds are involved in this level of structure
and the amino and carboxyl groups (backbone) form these bonds

, tertiary structure of protein Correct Answer: hydrogen, ionic and disulfide bonds as well as hydrophobic
interactions

quaternary structure of a protein Correct Answer: 2 or more polypeptides interact to form the protein

Fate of misfolded proteins Correct Answer: aggregation, degradation and refolding

What kind of interaction between misfolded protein leads to aggregation? Correct Answer: hydrophobic
interaction

What kind of proteins take part in the process involving refolding? Correct Answer: chaperones

A diabetic patient is suffering from ketoacidosis has low blood pH. What bond or interaction is most
likely to be disrupted within a patient's hemoglobin? Correct Answer: hydrogen bonds and ionic
interactions

A patient presents with a fever of 110 F. Which bond or interactions is most likely to be disrupted within
a neuronal protein if the fever isn't resolved quickly? Correct Answer: hydrophobic interactions

Frying an egg in a pan changes the egg white color, due to the protein ovalbumin, from translucent to
white. Which bond or interaction is most likely to be disrupted within the ovalbumin? Correct Answer:
hydrophobic interactions

Protein heated to 140F loss of function and denatured Correct Answer: loss of function and denatured

Native protein misfolds and remains misfolded loss of function and aggregated Correct Answer: loss of
function and aggregated

Normally active protein at physiological blood pH, where placed in a solution with a very low pH (less
than 2) loss of function and denatured Correct Answer: loss of function and denatured

Protein is placed in a solution with a very high pH (greater than 10) loss of function and denatured
Correct Answer: loss of function and denatured

Protein is modified by adding a phosphate group either loss or no loss of function Correct Answer: loss
or no loss of function

Composed of amino acids Correct Answer: Proteins, enzymes, cell membrane receptors, antibodies,
DNA polymerase

Enzymes are a Correct Answer: special type of protein, so they are also composed of amino acids

When the hydrophobic leucine (CH3) is replaced by the positively-charged arginine (NH2+), the protein
will misfold because the amino acids belong to different categories. Correct Answer: A missense
mutation in the gene coding for DNA polymerase replaces a leucine in position 44 with an arginine cause
the DNA polymerase to misfold

DNA polymerase is responsible for Correct Answer: synthesizing DNA in the DNA replication proess

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