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BIOL 209

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Exam of 58 pages for the course BIOL 209 at BIOL 209 (BIOL 209)

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Table of Contents

1. Section 1: Modes of Cell Signaling and Signal Transduction Principles (Q1–Q20)
2. Section 2: Receptors and Ligand Binding (Q21–Q40)
3. Section 3: G Protein–Coupled Receptors (GPCRs) and Heterotrimeric G Proteins (Q41–
Q60)
4. Section 4: Receptor Tyrosine Kinases (RTKs) and Ras/MAPK Signaling (Q61–Q80)
5. Section 5: Second Messengers: cAMP, cGMP, IP₃, DAG, and Calcium (Q81–Q100)
6. Section 6: Phosphoinositide 3-Kinase (PI3K), Akt, and mTOR Signaling (Q101–Q115)
7. Section 7: Cytokine Receptors, JAK–STAT, TGF-β, and Smad Signaling (Q116–Q130)
8. Section 8: Wnt, Notch, Hedgehog, and Developmental Signaling (Q131–Q140)
9. Section 9: Signal Termination, Desensitization, and Cross-Talk (Q141–Q150)




Section 1: Modes of Cell Signaling and Signal Transduction
Principles (Q1–Q20)
🟢 Q1. A researcher observes that a signaling molecule released by one cell diffuses
through the extracellular fluid and acts only on cells in its immediate vicinity. Which
mode of signaling is described?

A. Endocrine signaling
B. Paracrine signaling
C. Autocrine signaling
D. Synaptic signaling

🔴🔴 Correct Answer: B. Paracrine signaling

,Rationale: Paracrine signaling involves the release of signaling molecules that act on
nearby target cells, in contrast to endocrine signaling (long-distance via circulation) and
autocrine signaling (self-targeting). This is a foundational concept in Lodish’s
classification of signaling modes.




🟢 Q2. Which of the following best explains why a single signaling molecule can produce
different responses in different cell types?

A. Different cells express different receptors for the same ligand.
B. The ligand has different chemical structures in different tissues.
C. The signal is always transduced through the same intracellular pathway.
D. Only one cell type can respond to any given ligand.

🔴🔴 Correct Answer: A. Different cells express different receptors for the same ligand.

Rationale: Cell-type specificity arises from differential receptor expression and
downstream effector proteins, not from structural variation in the ligand itself. This
principle is emphasized in Alberts’ Molecular Biology of the Cell.




🟢 Q3. A cell suddenly loses the ability to synthesize GTP. Which aspect of G protein–
mediated signaling would be most directly impaired?

A. Ligand binding to the receptor
B. Activation and inactivation of the G protein
C. Phosphorylation of downstream kinases
D. Second messenger degradation

🔴🔴 Correct Answer: B. Activation and inactivation of the G protein

Rationale: Heterotrimeric G proteins require GTP binding for activation and intrinsic
GTPase activity for inactivation; without GTP, the cycle cannot proceed.

,🟢 Q4. Which of the following statements about signal transduction pathways is FALSE?
A. Signal transduction often involves amplification of the initial signal.
B. Phosphorylation cascades are a common mechanism for signal relay.
C. Signal transduction always results in gene transcription.
D. Intracellular signaling proteins can integrate multiple inputs.

🔴🔴 Correct Answer: C. Signal transduction always results in gene transcription.

Rationale: Signal transduction can produce rapid, non-transcriptional responses (e.g.,
changes in enzyme activity, ion channel opening, cytoskeletal rearrangement). Gene
transcription is only one possible outcome.




🟢 Q5. In a phosphorylation cascade, protein kinases sequentially phosphorylate and
activate downstream kinases. Which property is NOT typically enhanced by such a
cascade?

A. Signal amplification
B. Speed of signal propagation
C. Ability to reverse the signal quickly
D. Potential for cross-talk between pathways

🔴🔴 Correct Answer: C. Ability to reverse the signal quickly

Rationale: Phosphorylation cascades amplify and propagate signals but are not
designed for rapid reversal; dephosphorylation by phosphatases and protein
degradation are required for termination. Alberts discusses the trade-offs between
speed, amplification, and reversibility in kinase cascades.




🟢 Q6. A signaling molecule binds to a receptor and triggers a conformational change
that activates an associated intracellular protein. This is an example of:

A. Signal reception
B. Signal transduction

, C. Signal integration
D. Signal termination

🔴🔴 Correct Answer: B. Signal transduction

Rationale: Transduction is the process by which a receptor converts an extracellular
signal into an intracellular signal, often through conformational changes and protein–
protein interactions.




🟢 Q7. Which type of signaling requires direct physical contact between the signaling cell
and the target cell?

A. Endocrine
B. Paracrine
C. Contact-dependent (juxtacrine)
D. Synaptic

🔴🔴 Correct Answer: C. Contact-dependent (juxtacrine)

Rationale: Juxtacrine signaling involves membrane-bound ligands on one cell
interacting with receptors on an adjacent cell, as seen in Notch–Delta signaling.




🟢 Q8. A mutation renders a G protein incapable of hydrolyzing GTP to GDP. What is the
most likely consequence for signaling?

A. The pathway is constitutively active.
B. The pathway is permanently inactive.
C. The receptor cannot bind ligand.
D. Second messengers are degraded more rapidly.

🔴🔴 Correct Answer: A. The pathway is constitutively active.

Rationale: Without GTP hydrolysis, the G protein remains in its active, GTP-bound state,
leading to continuous downstream activation. This is the mechanism of action of cholera
toxin (which modifies Gαs) and certain oncogenic mutations.

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