Anatomy and physiology
Anatomical nomenclature
Refers to anatomical positions standard reference for describing the body
Arms at the side palms facing forwards, feet shoulder width apart, toes forward
(this is the position you assume the body, regardless of actual orientation).
Prone- face down
Supine- face up
Brachium = upper arm
Antebrachium = forearm
Femur = thigh
Crus = leg (knee- ankle)
Anterior/ventral , front, toes are anterior to the foot (toes are Infront of the foot)
Posterior/ dorsal, back, popliteus is posterior to patella (popliteus is behind the
patella)
Superior/ cranial, above, orbits are superior to the oris
Inferior/ caudal, below, pelvis is inferior to abdomen.
Lateral, towards the side, thumb is lateral to digits
Medial, towards midline, hallux is the medial toe (middle toe)
Proximal, near trunk, brachium proximal to antebrachium
Distal, away from trunk, crus distal to femur
Superficial, near surface, skin is superficial to bones
Deep, far from the surface, the brain is deep to the skull.
Sagittal plane- divides body into left & right. (midsagittal= equal halves.
Parasagittal= unequal halves).
Frontal (coronal) plane= divides body into anterior and posterior
Transverse (horizontal) plane = divides body in superior and inferior, produces
cross sections.
Dorsal (posterior) cavity = cranial cavity (brain), vertebral cavity (spinal cord).
Ventral (Anterior) cavity= thoracic cavity (lungs, heart (in mediastinum).
Abdominopelvic cavity- abdominal (digestive organs), pelvic (reproductive organs).
Abdominal regions & quadrants
Nine regions
Right/left hypochondriac
Right/ left lumbar
Right/left iliac
Epigastric
Umbilical
, Hypogastric
Four quadrants
Right upper (RUQ)
Left upper (LUQ)
Right lower (RLQ)
Left lower (LLQ)
Genes
A gene is a segment of DNA that give cells instruction for a specific trait or body
function.
Genes code for proteins which control everything from appearance to internal
functions
Human have 20000 genes that code for proteins
Genes are packaged in chromosomes inside the nucleus
Genes and alleles
You inherit two copies of each gene- one from each biological parent.
Alleles= different versions of the same gene
Genotype= alleles you carry
Phenotypes= traits your show
How genes work
DNA - mRNA (transcription) mRNA copies the genes instructions.
mRNA - Protein (translation) Ribosomes read mRNA in codons (3 letter sequences)
each codon= specific amino acid or start/stop sequence.
There are 20 amino acids, but >100,000 proteins in humans.
Genes can be turned on/off depending on cell type, injury, illness, or environment
(epigenetics)
Cell differentiation
Cell differentiation is the process in which unspecialised cells become specialised in
structure and function
Formation of tissues, organs and body systems
Replacement of damaged or dead cells
Cancer
Developmental disorders.
Pattern formation
Is the process in which cells in a developing embryo acquire spatial organisation,
forming tissues, organs and body axes.
Morphogens= signalling molecules distributed in gradients
, Sonic hedgehog (Shh) gradient in limb development ( high Shh- posterior digits
(little finger), low Shh- anterior digits (thumb)).
Positional information= cues that tell a cell where it is
Segmentation= repeated structural units
Collinearity- Hox gene order matches body axis order.
Ontogeny
Refers to the entire developmental journey of an organism from fertilisation-
embryonic development- birth- maturity- ageing.
Stages of ontogeny
Fertilisation- fusion of sperm and oocyte (zygote), restores diploid chromosome
number, activates early gene expression.
Cleavage- rapid mitotic divisions without growth. Forms morula- blastocyst.
Gastrulation-formation of three germ layers; ectoderm- skin, nervous system.
Mesoderm- muscle, bone, blood. Endoderm- gut, liver, lungs.
Organogenesis- germ layers differentiate into organs and systems, pattern
formation and morphogenesis occur.
Foetal development- growth, maturation, refinement of organ systems.
Postnatal development- growth, neural development, immune maturation
Maturity- reproductive capability reached, homeostasis stabilised.
Senescence (Ageing)- gradual decline in physiological function, uncreased
susceptibility to disease.
Osteogenesis
Is the process by which bone tissue forms (beginning in embryo and continues
through childhood and adulthood).
Function of osteogenesis
Formation of skeletal framework
Protection of organs
Enabling movement
Mineral storage
Blood cell production
Types of ossification
Intramembranous ossification- forms flat bones (Skull bones, mandible, clavicle
(partially))
Process
Mesenchymal cells cluster- differentiate into osteoblasts
Osteoblasts secrete osteoid (unmineralized bone matrix)
Osteoid becomes mineralised with calcium salts
Osteoblasts trapped in matrix become osteocytes
, Trabeculae form- compact bone develops at edge
Key features
No cartilage template
Direct bone formation
Produces spongy bone first, then compact bone.
Endochrondral ossification
Forms long bones and most of the skeleton
Process
Hyaline cartilage model- forms in embryo
Cartilage grows- chondrocytes enlarge and die
Primary ossification centre forms in diaphysis
Blood vessels invade- bring osteoblasts
Secondary ossification centres forms in epiphyses
Growth plates (epiphyseal plate) remains for lengthening
Plate ossifies at puberty- growth stops
Bone growth
Longitudinal growth (occurs at epiphyseal plate)
Zone of resting cartilage
Zone of proliferation
Zone of hypertrophy
Zone of calcification
Zone of ossification
Growth stops when the plate becomes the epiphyseal line.
Appositional growth (width)
Osteoblasts add bone to outer surface
Osteoclast remove bone from inner surface- maintains proper thickness and
medullary cavity size.
Osteogenesis: intramembranous ossification
Process in which bone develops directly from mesenchymal tissue, without a
cartilage template, it forms flat bones of the skull, the mandible and part of the
clavicle.
Where it occurs- flat bones of the cranial vault, mandible, clavicle, facial bones
Overview of the process
Mesenchymal cell condensation (mesenchymal stem cells cluster in connective
tissue membranes. They differentiate into osteoprogenitor cells then osteoblasts.
This forms an ossification center).
Anatomical nomenclature
Refers to anatomical positions standard reference for describing the body
Arms at the side palms facing forwards, feet shoulder width apart, toes forward
(this is the position you assume the body, regardless of actual orientation).
Prone- face down
Supine- face up
Brachium = upper arm
Antebrachium = forearm
Femur = thigh
Crus = leg (knee- ankle)
Anterior/ventral , front, toes are anterior to the foot (toes are Infront of the foot)
Posterior/ dorsal, back, popliteus is posterior to patella (popliteus is behind the
patella)
Superior/ cranial, above, orbits are superior to the oris
Inferior/ caudal, below, pelvis is inferior to abdomen.
Lateral, towards the side, thumb is lateral to digits
Medial, towards midline, hallux is the medial toe (middle toe)
Proximal, near trunk, brachium proximal to antebrachium
Distal, away from trunk, crus distal to femur
Superficial, near surface, skin is superficial to bones
Deep, far from the surface, the brain is deep to the skull.
Sagittal plane- divides body into left & right. (midsagittal= equal halves.
Parasagittal= unequal halves).
Frontal (coronal) plane= divides body into anterior and posterior
Transverse (horizontal) plane = divides body in superior and inferior, produces
cross sections.
Dorsal (posterior) cavity = cranial cavity (brain), vertebral cavity (spinal cord).
Ventral (Anterior) cavity= thoracic cavity (lungs, heart (in mediastinum).
Abdominopelvic cavity- abdominal (digestive organs), pelvic (reproductive organs).
Abdominal regions & quadrants
Nine regions
Right/left hypochondriac
Right/ left lumbar
Right/left iliac
Epigastric
Umbilical
, Hypogastric
Four quadrants
Right upper (RUQ)
Left upper (LUQ)
Right lower (RLQ)
Left lower (LLQ)
Genes
A gene is a segment of DNA that give cells instruction for a specific trait or body
function.
Genes code for proteins which control everything from appearance to internal
functions
Human have 20000 genes that code for proteins
Genes are packaged in chromosomes inside the nucleus
Genes and alleles
You inherit two copies of each gene- one from each biological parent.
Alleles= different versions of the same gene
Genotype= alleles you carry
Phenotypes= traits your show
How genes work
DNA - mRNA (transcription) mRNA copies the genes instructions.
mRNA - Protein (translation) Ribosomes read mRNA in codons (3 letter sequences)
each codon= specific amino acid or start/stop sequence.
There are 20 amino acids, but >100,000 proteins in humans.
Genes can be turned on/off depending on cell type, injury, illness, or environment
(epigenetics)
Cell differentiation
Cell differentiation is the process in which unspecialised cells become specialised in
structure and function
Formation of tissues, organs and body systems
Replacement of damaged or dead cells
Cancer
Developmental disorders.
Pattern formation
Is the process in which cells in a developing embryo acquire spatial organisation,
forming tissues, organs and body axes.
Morphogens= signalling molecules distributed in gradients
, Sonic hedgehog (Shh) gradient in limb development ( high Shh- posterior digits
(little finger), low Shh- anterior digits (thumb)).
Positional information= cues that tell a cell where it is
Segmentation= repeated structural units
Collinearity- Hox gene order matches body axis order.
Ontogeny
Refers to the entire developmental journey of an organism from fertilisation-
embryonic development- birth- maturity- ageing.
Stages of ontogeny
Fertilisation- fusion of sperm and oocyte (zygote), restores diploid chromosome
number, activates early gene expression.
Cleavage- rapid mitotic divisions without growth. Forms morula- blastocyst.
Gastrulation-formation of three germ layers; ectoderm- skin, nervous system.
Mesoderm- muscle, bone, blood. Endoderm- gut, liver, lungs.
Organogenesis- germ layers differentiate into organs and systems, pattern
formation and morphogenesis occur.
Foetal development- growth, maturation, refinement of organ systems.
Postnatal development- growth, neural development, immune maturation
Maturity- reproductive capability reached, homeostasis stabilised.
Senescence (Ageing)- gradual decline in physiological function, uncreased
susceptibility to disease.
Osteogenesis
Is the process by which bone tissue forms (beginning in embryo and continues
through childhood and adulthood).
Function of osteogenesis
Formation of skeletal framework
Protection of organs
Enabling movement
Mineral storage
Blood cell production
Types of ossification
Intramembranous ossification- forms flat bones (Skull bones, mandible, clavicle
(partially))
Process
Mesenchymal cells cluster- differentiate into osteoblasts
Osteoblasts secrete osteoid (unmineralized bone matrix)
Osteoid becomes mineralised with calcium salts
Osteoblasts trapped in matrix become osteocytes
, Trabeculae form- compact bone develops at edge
Key features
No cartilage template
Direct bone formation
Produces spongy bone first, then compact bone.
Endochrondral ossification
Forms long bones and most of the skeleton
Process
Hyaline cartilage model- forms in embryo
Cartilage grows- chondrocytes enlarge and die
Primary ossification centre forms in diaphysis
Blood vessels invade- bring osteoblasts
Secondary ossification centres forms in epiphyses
Growth plates (epiphyseal plate) remains for lengthening
Plate ossifies at puberty- growth stops
Bone growth
Longitudinal growth (occurs at epiphyseal plate)
Zone of resting cartilage
Zone of proliferation
Zone of hypertrophy
Zone of calcification
Zone of ossification
Growth stops when the plate becomes the epiphyseal line.
Appositional growth (width)
Osteoblasts add bone to outer surface
Osteoclast remove bone from inner surface- maintains proper thickness and
medullary cavity size.
Osteogenesis: intramembranous ossification
Process in which bone develops directly from mesenchymal tissue, without a
cartilage template, it forms flat bones of the skull, the mandible and part of the
clavicle.
Where it occurs- flat bones of the cranial vault, mandible, clavicle, facial bones
Overview of the process
Mesenchymal cell condensation (mesenchymal stem cells cluster in connective
tissue membranes. They differentiate into osteoprogenitor cells then osteoblasts.
This forms an ossification center).