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Summary - Biochemistry (4BBY1013)

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A comprehensive, highly detailed summary of the Kings College London Biochemistry module (4BBY1013), one of the core modules taken in 'Common Year One' of courses such as Biomedical Science, Neuroscience and Biochemistry in the Faculty of Life Sciences and Medicine. The summary covers all the lectures in depth, as well as extra reading from core textbooks already incorporated into the notes, so no extra work is needed to obtain the highest marks. I memorised this document alone and placed first in the year with 93% in the exam! Topics covered include DNA replication and protein synthesis, protein metabolism, oxidative phosphorylation/glycolysis/TCA cycle, nitrogen metabolism and urea cycle, fate metabolism, amino acids, carbohydrates/sugars and more. It would therefore also be relevant for anyone studying foundational life sciences from medical students to nursing trainees etc.

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biochemistry
Created @December 6, 2022 1:01 PM

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biochemistry 1

, link reaction (decarboxylation) is irreversible which is why you can’t make
glucose from fats

Molecules of life


biochemistry 2

, outline the chemical features and properties of the four main classes of
biological molecules (carbohydrates, lipids, nucleic acids and proteins), and
recognise that complex biological macromolecules are composed of smaller
biomolecules.

carbohydrates

properties = nxCH2O, carbonyl (C=O) and hydroxyl (OH) groups,
hydrophilic, polar, water soluble, can be modified with lipids/proteins

monomer = monosaccharide

bonds = glycosidic > di/oligo/polysaccharides

role = energy source/storage, surface recognition molecules

lipids

properties = water insoluble, hydrophobic, organic soluble, melting point
determined by fatty acids (FAs), amphipathic = bilayer

monomer = FA = hydrophilic carboxyl head and hydrophobic CH tail,
varying length and saturation

bonds = ester bond between FAs and glycerol/phosphate with hydrophilic
head

role = energy storage (triacylglycerol droplets), membrane bilayer
(glycerophospholipids), steroid hormones (fused alkyl rings), cholesterol
(steroid, fluidity of membrane)

nucleic acids

monomer = nucleotides: pentose sugar, nitrogenous base
(pyrimidine/purine), phosphate

bonds = phosphodiester and hydrogen (h) bonds > RNA/DNA

role = info carrier, energy carrier eg. ATP (phosphoanhydride bonds)

proteins

monomer = amino acids (AAs): 20, water soluble, differ in R groups

bonds = peptide bonds > polypeptide/protein




biochemistry 3

, role = mechanical, transport, enzymes

distinguish aldose and ketose sugars and explain the formation of ring
structures of monosaccharides

aldose - aldehyde H-C=O group eg. glyceraldehyde 3C, ribose 5C,
glucose 6C

ketoses - ketone C=O eg. dihydroxyacetone 3C, ribulose 5C, fructose 6C

ring - 5/6C chains spontaneously form rings in aqueous = carbonyl reacts
with hydroxyl

distinguish isomeric forms of glucose: enantiomers, anomers and epimers

enantiomers = optical isomers, complete mirror eg. D/L glucose (natural -
D glucose - dextrose)

anomers = ring stereoisomers, differ around one anomeric carbon C1 (O
on either side, from carbonyl) eg. a-D glucose and b-D glucose, can flip
when free in solution

epimers = different arrangement of one OH group not on anomeric C eg. D
glucose and D galactose

structural isomers eg. glucose and fructose

recognise and name correctly α and β glycosidic bonds in disaccharides and
polysaccharides

alpha glucose - OH on bottom (when writing ‘a ‘pen goes down)

beta glucose - OH on top (when writing ‘’ pen goes up)

glycosidic bond fixes in a/b form

glycogen = a1,4 and a1,6, to branch

draw the chemical structure of a representative amino acid (alanine) and a
peptide bond between two amino acid residues

amino group/n terminus on left, carboxyl/c terminus on right (see
diagrams)

explain how amino acids are grouped according to the characteristics of their
side chains



biochemistry 4
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