computational biology

Samenvatting van de colleges en opdrachten, gebaseerd op het boek. Summary of the lectures and exercises, based on the book.

• Atomic-level modeling of biological macromolecules – Energy functions and their relationship to molecular conformation – Molecular dynamics simulation – Protein structure prediction – Protein design – Ligand docking • Coarser-level modeling and imaging-based methods – Fourier transforms and convolution – Image analysis – Microscopy – X-ray crystallography – Cryoelectron microscopy – Diffusion and cellular-level simulation • Recurring themes

Test Details The exam will be held on Friday, December 10, 2021 from 3:30 PM PM - 6:30 PM (in 320-105). The exam will be closed-book, but you may consult one double-sided 8.5x11 page (or two single-sided pages). Instructions These are practice questions in the style of questions you might expect on the exam. Each question should be answerable in a few sentences (that is, you’re not required to provide a great deal of detail). Question 1: Compare and contrast the energy functions used f...