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Biodiversity Genomics - Adaptation Genomics (QTL Mapping)

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Lecture notes from Imperial College London, Biological Sciences BSc, 3rd year, Biodiversity Genomics (BG) module. These lecture notes provide an in-depth exploration of Quantitative Trait Locus (QTL) Mapping, a powerful tool in adaptation genomics for identifying the genetic basis of complex traits. The document combines theoretical foundations with real-world examples to illustrate the application of QTL mapping across diverse species and traits. Examples of QTL Mapping: C. elegans Strains: Bristol and Bergerac Demonstrates QTL analysis to uncover the genetic basis of phenotypic differences such as body size and fertility between two Caenorhabditis elegans strains. Dog Body Size Explores the genetic determinants of body size variation in domestic dogs, highlighting loci responsible for the wide diversity in size among breeds. Peppered Moth Pigmentation Showcases the use of QTL mapping to identify genetic loci influencing pigmentation patterns in peppered moths, a classic example of adaptation to environmental pressures. This document is a valuable resource for students, offering explanations of QTL mapping techniques and practical examples that illuminate the genetic basis of adaptation in natural and experimental systems.

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Uploaded on
November 30, 2024
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Written in
2023/2024
Type
Lecture notes
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Armand leroi
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Friday 20 October 2023
Lecture 16 – Adaptation Genomics: Quantitative Trait Locus (QTL) Mapping


Genome scans and statistical tests can be used to identify regions of the genome that are
under selection
To understand what the genes are being selected for requires working from the genotype to
the phenotype (knocking out genes, how the gene affects development, how it functions in
the wild)
Instead starting with the phenotype – phenotypic variation in the population is heritable and
identify the genes responsible by QTL mapping using genetic markers

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