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Introduction to proteomics - notes from fundamentals course

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Notes on the introduction of proteomics

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Uploaded on
March 9, 2021
Number of pages
9
Written in
2020/2021
Type
Lecture notes
Professor(s)
Prof. stuart maudsley, prof. xaveer van ostade
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All classes

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PRO




PROTEOMICS

, PROTEOMICS - INTRODUCTION

Proteomics is the large scale of study of proteins, particularly their function and

structure. Proteomics is an excellent approach for studying changes in

metabolism in response to different stress conditions. In the present review

focused on different types of techniques for the analysis of expressed proteins.

The techniques include 2-D gel electrophoresis, MALDI-TOF/MS etc., play a

vital role for the analysis of novel proteins and their role in disease maintenance

and treatment. The review also concentrated on applicative perspective of

proteomics in the fields of biomedical, agriculture and food.

MASS SPECTROMETRY – INSTRUMENTS

The molecules from a sample are ionized and converted to the gas phase,
followed by separation according to their mass/charge (m/z) ratio -> NOT
ONLY MASS! Hence, after ionisation of a molecule by the addition of H+ ions,
the m/z ratio of the molecule is measured. The same hold for the opposite when
H+ is removed.




The essential steps in mass spectrometry are:

1) Production of ions in the gas phase
2) Acceleration of ions in an electric field
3) Separation of ions by a mass analyser
4) Detection of each ion with a specific m/z ratio
5) The whole instrument has a high vacuum: 10-6Torr (non-SI unit of
pressure)
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