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Lecture notes

Lecture Notes

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Lecture notes of 7 pages for the course Techniques For Biological And Chemical Sciences at QMUL










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Uploaded on
March 5, 2021
Number of pages
7
Written in
2020/2021
Type
Lecture notes
Professor(s)
Professor pickersgill
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All classes

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UV-Visible and fluorescence spectroscopy
Learning objectives:

 Describe the physical principle behind UV-Vis spectroscopy
 Draw the basic elements of a spectrometer
 Define absorbance and transmission of light
 Apply the Beer-Lambert law to measure concentration
 Calculate the extinction coefficient of a protein using its primary sequence
 Review the applications of UV-Vis spectroscopy in monitoring reactions
 Review the applications of UV-Vis spectroscopy in studying metallo-proteins

UV-Visible spectroscopy (electron absorption spectroscopy)

 Principle:
- Measure the absorption of specific wavelengths of UV and Visible light. Due to transitions of electrons from a
ground state to an excited state
- This is an energy difference between the two electron energy levels (or orbitals).
- Energy difference = Planck's constant * speed of light /wavelength of approaching light
- To cause a particular electronic transition only light with the same energy (wave length) will be absorbed by the
molecule
- Examples:
groups that absorb visible (400-800 nm) and UV (185-400 nm) light have unsaturated bonds, lone pair
electrons or D orbitals
- Light source from a light bulb
- Light is only absorbed if it equals the energy gap if not it will pass through the other side
- Water does not absorb visible light and therefore can see through it
- The wavelength of light absorbed gives us information about these energy gaps
- Every molecule has different electrical orbital




The colours of light

 Aromatics absorb at 280nm
 Carbonyl stretch absorbs at 1600nm
 Red is at the long end hence infrared and UV is strong radiation
 Violet at the short end
 Copper sulphate is blue in solution as absorbs red and yellow light

, Haemoglobin

 Haemoglobin is red because it has a porphine ring and a metal ion
 The heme in haemoglobin absorbs light at 440nm, which is not the red colour but blue




UV Visible spectrometer

 Range between £5,000-£25,000
 Quarts cuvets are £100
 Plastic cuvets are cheaper
 Path length is 1 cm
 Width is 1 cm

UV-Vis Spectrometer instrument

 Light source: typically, 2 lamps a deuterium for UV and tungsten for visible
 Monochromator:
- diffraction grating to separate wavelength of light.
- Physically turns to catch the different wavelengths of light.
- Differaction gradient records each wavelength of light
 Sample holder:
- typical cell is 1 cm
 Detector:
- photo multiplier
- Measures light.
 Plotter:
- computer
 These are optics inside the instrument

Absorbance and Transmittance

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