BCH5413 - Exam 3 Questions And
Answers
3tbreakpointstintBcrtaretobservedtintchromosomalttranslocationstintdifferentttypestoftleukem
iast-tCORRECTttANSWER-ALL,tCML,tandtCNL
3tkeytmembrane-associatedtcomponentstintGPCRtsignalingt-tCORRECTttANSWER-
1.treceptorst(GPCR)
2.theterotrimerictGtproteins
3.teffectortproteins
Atmajoritytoftp53tmutationstinthumantcancerstaretwhatttypetoftmutationt-
tCORRECTttANSWER-missensetpoint
-tthetvasttmajoritytaffecttthetDNAtbindingtdomain
Atmutationtis..t-tCORRECTttANSWER-atchangetintthetnormaltsequencetoftDNA
Activatedtmitotictcyclin-cdktmaintaintthetactivetstatetbytregulatingtbotht__andt__t-
tCORRECTttANSWER-Wee1tandtCdc25
*havetoppositeteffectstontmitotictcdktactivity
ActivatingtMutationstintSrctFamilytKinasest-tCORRECTttANSWER--tSrctistatnon-
receptorttyrosinetkinase
-tnormaltSrctproteinstaretinactivatedtwhentTyrtistphosphorylatedtbytCsk
-tactivatingtmutationstresulttintSrctoncoproteintlackingtthetinhibitorytphosphorylationtsite
-tviraltSrctlackstc-terminaltTyrtsitetandtistconstitutivelytactive
Activationtoftacetylcholinetreceptort(GPCR)tandtitsteffectortK+tchannelt-
tCORRECTttANSWER--tbindingtoftacetylcholinettotitstreceptortactivatestG-alpha-
itandtdissociatestittfromtG-betatgamma
-tthetreleasedtG-betatgammatsubunitt(rathertthantG-alpha-
i)tbindsttottheteffectortprotein:tatK+tchannel,tandtopenstit
ActivationtoftCREBttranscriptiontfactortfollowingtligandtbindingttotGPCR'st-
tCORRECTttANSWER--tligandtbindingttotGPCRtactivatestG-
alphatandtadenylyltcyclasettotproducetcAMP
,-
tcAMPtbindsttotandtactivatestPKA.tCatalytictsubunitstoftPKAttranslocatetintotnucleustandtph
osphorylatettranscriptiontfactortCREB
-tphosphorylatedtCREBtrecruitstcoactivatortp300/CBPttotstimulatettargettgenettranscription
Activationtoftmitotictcdk
-tundertwhattcircumstancestdoestassociationtwithtcdktoccur
-twhattinhibitstcdktactivity
-twhattactivatestcdktactivityt-tCORRECTttANSWER--
tmitotictcyclintlevelstrise,tassociatetwithtmitotictcdkt(partiallytactive)
-tWee1tphosphorylatestmitotictcdkttyrosinetY15tinhibitingtactivity
-
tCAKtphosphorylatestmitotictcdktthreoninet161tactivatingtsite.tButtwhentY15tistphosphorylat
ed,tmitotictcdktremainstinactive
-tmitotictcyclin-
cdktcantbetactivatedtonlytaftertcdc25tremovestphosphatetfromtinhibitorytsitet(Y15)twhiletpho
sphorylationtoftactivetsitetistmaintainedt(CKItmusttalsotbetremoved)
ActivationtoftPKAtbytcAMPt-tCORRECTttANSWER--
tPKAthasttwotregulatorytsubunitstandt2tcatalytictsubunits
-
twhentcAMPtbindsttotthetregulatorytsubunitst(eachtregulatorytsubunittbindst2tcAMPtmolecul
es),tthetcatalytictsubunitstaretreleasedtandtactivated
ActivationtoftPKCtbytDAGtandtIP3t-tCORRECTttANSWER--
tligandtbindingttotGPCRtactivatestG-alphatleadingttotactivationtoftPLC
-tPLCtcleavestPIP2ttotgeneratetDAGtandtIP3
-tIP3tdiffusestintotcytosol,tbindsttotopentCa++tchannelstandtimportstCa++tintotthetcytosol
-
televatedtcytosolictCa++trecruitstPKCttotthetplasmatmembrane,twheretittistactivatedtbytDAG
-tactivatedtPKCtphosphorylatestdownstreamtsubstrates
ActivationtoftRastfollowingtligandtbindingttotRTK's
-tGTP-boundtRastis...
-thydrolysist-tCORRECTttANSWER-GTP-boundtRastistfunctional
-thydrolysistoftGTPtbytRastistfacilitatedtbytGAPtwhichtleadsttotGDP-
boundtRas,twhichtistinactive
ActivationtoftRastfollowingtligandtbindingttotRTK's
-tRastistfrequentlytactivatedtby...t-tCORRECTttANSWER-mutationtintcancer
ActivationtoftRastfollowingtligandtbindingttotRTK's
-twhattistRast-tCORRECTttANSWER-Rastistatsmall,tmonomerictGtprotein
ActivationtoftRTKtproto-oncogenes
,-t2twayst-tCORRECTttANSWER-
1.tpointtmutationtintHer2ttransmembranetdomaintcausestreceptortdimerizationtconstitutivel
ytactivatingtthetreceptor
2.tatmutationtcausestdeletiontoftEGFRtextracellulartdomains,tleadingttotreceptortdimerizatio
ntandtactivationtwithouttatligand
Alkylatingtagentstaddtalkyltgroupstto...t-tCORRECTttANSWER-bases
AllosterictactivationtoftligandstbindingttotGPCRt-tCORRECTttANSWER-
ligandtbindingttotGPCRtcausestallosterictconformationaltchangestintcytosolictdomainstoftth
etreceptor,tleadingttotrecruitmenttoftGtproteins
Alteredtglucosetmetabolismtintcancert-tCORRECTttANSWER-Normaltcell
-toxidativetmetabolismt
Cancertcell
-taerobictglycolysis
-tresultstintproliferationtandtmetastasistchemoresistance
ALVtandtc-myc
-tacutetandtslowttransformingtvirust-tCORRECTttANSWER-Acutettransforming
-teverytinfectedtcelltexpressestthetviraltoncogenet(rapidttumortformation)
Slowttransforming
-tonlytraretinfectedtcellstactivatetcellulartproto-oncogenestbytinsertiont(lowttumorigenicity)
ALVtandtc-Myc
-thowtittworkst-tCORRECTttANSWER-ALVtprovirustsometimestinsertstadjacentttotc-
myctproto-oncogenetandtthetALVtpromotertstronglytinducestc-myctexpression
-tthistexpressiontdrivestcelltproliferationtandtarettransformed
Anaphase:twhattoccurstconcerningtAPC,tchromatids,tspindletmicrotubulest-
tCORRECTttANSWER--tAPCtistactivatedtandtdegradestcohesinet
-tAPCtallowstsistertchromatidsttotseparate
-
tshorteningtoftspindletmicrotubulestpullstseparatedtsistertchromatidsttowardtoppositetsidest
oftthetcell
APCtandtanaphase-telophasettransitiont-tCORRECTttANSWER-intlatetanaphase,tAPC-
cdh1tdestructstmitotictcyclin,tthustinactivatingtmitotictcdktandttriggeringtentrytintottelophase
APCtistatwhat..t-tCORRECTttANSWER-E3tubiquitintligase
Arettheretmoretnon-codingtRNA'stortgenest-tCORRECTttANSWER-non-codingtRNAs
, Arettumortcellstpure?t-tCORRECTttANSWER-NO
-ttumortcellstfromtdifferenttareastaretdifferent
Arraytcomparativetgenomicthybridizationt(aCGH)
-twhattdoestittmeasuret-tCORRECTttANSWER-
measurementtoftgenetcopytnumbertinttumortsamples
-tgenometwidetdetectiontoftamplificationtand/ortdeletion
*strengthtoftfluorescenttsignalstcorrelatesttotgenetcopytnumber
BasetExcisiontRepairt(BER)toftatT-Gtmismatch
-tstepst-tCORRECTttANSWER-1.tspecifictDNAtglycosylasetrecognizestT-
Gtmismatch,tremovestTtfromthelix,tbreakstglycosidictbond,tandtclipstouttthetwrong/damage
dtbase.tThistleadsttotantAPtsitet
2.tAntAPtendonucleaset(APE1)trecognizestthetAPtsite,tnickstthetDNAtstrandtontitst5'tside
3.tAtlyasetremovestthethangingtdeoxyribosetphosphate
4.tDNAtPol-betatfillstintthetgaptwithtatnormaltnucleotidet(C)tandtDNAtligasetsealstthetnick
Becausetcelltcycletregulatorstarethighlytconserved,t____tcantoftentrescuetyeasttcdctmutant
st-tCORRECTttANSWER-humantcDNA's
Bindingtoftcdh1ttotAPCtistregulatedtby..t-tCORRECTttANSWER-phosphorylation
-tG1tcyclin-cdktinhibitstCdh1
-tphosphatasaetcdc14tactivatestcdh1
BishoptandtVarmustdiscoveryt-tCORRECTttANSWER-hosttcellsthavetSrc-
relatedtsequences
BRCA-deficienttcancertcellstaretdefectivetin...t-tCORRECTttANSWER-
Homologoustrecombination
BRCA1t+tBRCA2t+tRad51
-twhattittdoest-tCORRECTttANSWER-promoteststrandtinvasiontandtDtlooptformation
-tplaytatkeytroletintthethomologoustrecombinationtprocesstandtrepairtoftdamagedtDNA
BRCA1/2tandtgenometintegrityt-tCORRECTttANSWER--
tBRCA1tproteintistatmultifunctionaltnucleartproteintinvolvedtintDNAtrepair,tcelltcycletregulati
on,ttranscriptionaltcontrol,tchromatintremodeling
-tBRCA2tfunctionstontdoubletstrandtbreaktrepair
BRCA1/2:tsynthetictlethalitytwithtPARP1tinhibition
-ttwotgenestaretsynthetictlethaltif...
Answers
3tbreakpointstintBcrtaretobservedtintchromosomalttranslocationstintdifferentttypestoftleukem
iast-tCORRECTttANSWER-ALL,tCML,tandtCNL
3tkeytmembrane-associatedtcomponentstintGPCRtsignalingt-tCORRECTttANSWER-
1.treceptorst(GPCR)
2.theterotrimerictGtproteins
3.teffectortproteins
Atmajoritytoftp53tmutationstinthumantcancerstaretwhatttypetoftmutationt-
tCORRECTttANSWER-missensetpoint
-tthetvasttmajoritytaffecttthetDNAtbindingtdomain
Atmutationtis..t-tCORRECTttANSWER-atchangetintthetnormaltsequencetoftDNA
Activatedtmitotictcyclin-cdktmaintaintthetactivetstatetbytregulatingtbotht__andt__t-
tCORRECTttANSWER-Wee1tandtCdc25
*havetoppositeteffectstontmitotictcdktactivity
ActivatingtMutationstintSrctFamilytKinasest-tCORRECTttANSWER--tSrctistatnon-
receptorttyrosinetkinase
-tnormaltSrctproteinstaretinactivatedtwhentTyrtistphosphorylatedtbytCsk
-tactivatingtmutationstresulttintSrctoncoproteintlackingtthetinhibitorytphosphorylationtsite
-tviraltSrctlackstc-terminaltTyrtsitetandtistconstitutivelytactive
Activationtoftacetylcholinetreceptort(GPCR)tandtitsteffectortK+tchannelt-
tCORRECTttANSWER--tbindingtoftacetylcholinettotitstreceptortactivatestG-alpha-
itandtdissociatestittfromtG-betatgamma
-tthetreleasedtG-betatgammatsubunitt(rathertthantG-alpha-
i)tbindsttottheteffectortprotein:tatK+tchannel,tandtopenstit
ActivationtoftCREBttranscriptiontfactortfollowingtligandtbindingttotGPCR'st-
tCORRECTttANSWER--tligandtbindingttotGPCRtactivatestG-
alphatandtadenylyltcyclasettotproducetcAMP
,-
tcAMPtbindsttotandtactivatestPKA.tCatalytictsubunitstoftPKAttranslocatetintotnucleustandtph
osphorylatettranscriptiontfactortCREB
-tphosphorylatedtCREBtrecruitstcoactivatortp300/CBPttotstimulatettargettgenettranscription
Activationtoftmitotictcdk
-tundertwhattcircumstancestdoestassociationtwithtcdktoccur
-twhattinhibitstcdktactivity
-twhattactivatestcdktactivityt-tCORRECTttANSWER--
tmitotictcyclintlevelstrise,tassociatetwithtmitotictcdkt(partiallytactive)
-tWee1tphosphorylatestmitotictcdkttyrosinetY15tinhibitingtactivity
-
tCAKtphosphorylatestmitotictcdktthreoninet161tactivatingtsite.tButtwhentY15tistphosphorylat
ed,tmitotictcdktremainstinactive
-tmitotictcyclin-
cdktcantbetactivatedtonlytaftertcdc25tremovestphosphatetfromtinhibitorytsitet(Y15)twhiletpho
sphorylationtoftactivetsitetistmaintainedt(CKItmusttalsotbetremoved)
ActivationtoftPKAtbytcAMPt-tCORRECTttANSWER--
tPKAthasttwotregulatorytsubunitstandt2tcatalytictsubunits
-
twhentcAMPtbindsttotthetregulatorytsubunitst(eachtregulatorytsubunittbindst2tcAMPtmolecul
es),tthetcatalytictsubunitstaretreleasedtandtactivated
ActivationtoftPKCtbytDAGtandtIP3t-tCORRECTttANSWER--
tligandtbindingttotGPCRtactivatestG-alphatleadingttotactivationtoftPLC
-tPLCtcleavestPIP2ttotgeneratetDAGtandtIP3
-tIP3tdiffusestintotcytosol,tbindsttotopentCa++tchannelstandtimportstCa++tintotthetcytosol
-
televatedtcytosolictCa++trecruitstPKCttotthetplasmatmembrane,twheretittistactivatedtbytDAG
-tactivatedtPKCtphosphorylatestdownstreamtsubstrates
ActivationtoftRastfollowingtligandtbindingttotRTK's
-tGTP-boundtRastis...
-thydrolysist-tCORRECTttANSWER-GTP-boundtRastistfunctional
-thydrolysistoftGTPtbytRastistfacilitatedtbytGAPtwhichtleadsttotGDP-
boundtRas,twhichtistinactive
ActivationtoftRastfollowingtligandtbindingttotRTK's
-tRastistfrequentlytactivatedtby...t-tCORRECTttANSWER-mutationtintcancer
ActivationtoftRastfollowingtligandtbindingttotRTK's
-twhattistRast-tCORRECTttANSWER-Rastistatsmall,tmonomerictGtprotein
ActivationtoftRTKtproto-oncogenes
,-t2twayst-tCORRECTttANSWER-
1.tpointtmutationtintHer2ttransmembranetdomaintcausestreceptortdimerizationtconstitutivel
ytactivatingtthetreceptor
2.tatmutationtcausestdeletiontoftEGFRtextracellulartdomains,tleadingttotreceptortdimerizatio
ntandtactivationtwithouttatligand
Alkylatingtagentstaddtalkyltgroupstto...t-tCORRECTttANSWER-bases
AllosterictactivationtoftligandstbindingttotGPCRt-tCORRECTttANSWER-
ligandtbindingttotGPCRtcausestallosterictconformationaltchangestintcytosolictdomainstoftth
etreceptor,tleadingttotrecruitmenttoftGtproteins
Alteredtglucosetmetabolismtintcancert-tCORRECTttANSWER-Normaltcell
-toxidativetmetabolismt
Cancertcell
-taerobictglycolysis
-tresultstintproliferationtandtmetastasistchemoresistance
ALVtandtc-myc
-tacutetandtslowttransformingtvirust-tCORRECTttANSWER-Acutettransforming
-teverytinfectedtcelltexpressestthetviraltoncogenet(rapidttumortformation)
Slowttransforming
-tonlytraretinfectedtcellstactivatetcellulartproto-oncogenestbytinsertiont(lowttumorigenicity)
ALVtandtc-Myc
-thowtittworkst-tCORRECTttANSWER-ALVtprovirustsometimestinsertstadjacentttotc-
myctproto-oncogenetandtthetALVtpromotertstronglytinducestc-myctexpression
-tthistexpressiontdrivestcelltproliferationtandtarettransformed
Anaphase:twhattoccurstconcerningtAPC,tchromatids,tspindletmicrotubulest-
tCORRECTttANSWER--tAPCtistactivatedtandtdegradestcohesinet
-tAPCtallowstsistertchromatidsttotseparate
-
tshorteningtoftspindletmicrotubulestpullstseparatedtsistertchromatidsttowardtoppositetsidest
oftthetcell
APCtandtanaphase-telophasettransitiont-tCORRECTttANSWER-intlatetanaphase,tAPC-
cdh1tdestructstmitotictcyclin,tthustinactivatingtmitotictcdktandttriggeringtentrytintottelophase
APCtistatwhat..t-tCORRECTttANSWER-E3tubiquitintligase
Arettheretmoretnon-codingtRNA'stortgenest-tCORRECTttANSWER-non-codingtRNAs
, Arettumortcellstpure?t-tCORRECTttANSWER-NO
-ttumortcellstfromtdifferenttareastaretdifferent
Arraytcomparativetgenomicthybridizationt(aCGH)
-twhattdoestittmeasuret-tCORRECTttANSWER-
measurementtoftgenetcopytnumbertinttumortsamples
-tgenometwidetdetectiontoftamplificationtand/ortdeletion
*strengthtoftfluorescenttsignalstcorrelatesttotgenetcopytnumber
BasetExcisiontRepairt(BER)toftatT-Gtmismatch
-tstepst-tCORRECTttANSWER-1.tspecifictDNAtglycosylasetrecognizestT-
Gtmismatch,tremovestTtfromthelix,tbreakstglycosidictbond,tandtclipstouttthetwrong/damage
dtbase.tThistleadsttotantAPtsitet
2.tAntAPtendonucleaset(APE1)trecognizestthetAPtsite,tnickstthetDNAtstrandtontitst5'tside
3.tAtlyasetremovestthethangingtdeoxyribosetphosphate
4.tDNAtPol-betatfillstintthetgaptwithtatnormaltnucleotidet(C)tandtDNAtligasetsealstthetnick
Becausetcelltcycletregulatorstarethighlytconserved,t____tcantoftentrescuetyeasttcdctmutant
st-tCORRECTttANSWER-humantcDNA's
Bindingtoftcdh1ttotAPCtistregulatedtby..t-tCORRECTttANSWER-phosphorylation
-tG1tcyclin-cdktinhibitstCdh1
-tphosphatasaetcdc14tactivatestcdh1
BishoptandtVarmustdiscoveryt-tCORRECTttANSWER-hosttcellsthavetSrc-
relatedtsequences
BRCA-deficienttcancertcellstaretdefectivetin...t-tCORRECTttANSWER-
Homologoustrecombination
BRCA1t+tBRCA2t+tRad51
-twhattittdoest-tCORRECTttANSWER-promoteststrandtinvasiontandtDtlooptformation
-tplaytatkeytroletintthethomologoustrecombinationtprocesstandtrepairtoftdamagedtDNA
BRCA1/2tandtgenometintegrityt-tCORRECTttANSWER--
tBRCA1tproteintistatmultifunctionaltnucleartproteintinvolvedtintDNAtrepair,tcelltcycletregulati
on,ttranscriptionaltcontrol,tchromatintremodeling
-tBRCA2tfunctionstontdoubletstrandtbreaktrepair
BRCA1/2:tsynthetictlethalitytwithtPARP1tinhibition
-ttwotgenestaretsynthetictlethaltif...