BAILEY AND SCOTT DIAGNOSTIC MICROBIOLOGY
16TH Ed By Patricia
, Table of Contents sw sw
Chapter 01: Microbial Taxonomỵ .................................................................................................................... 3
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Chapter 02: Bacterial Genetics, Metabolism, and Structure ...................................................................... 6
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Chapter 03: Host-Microorganism Interactions ............................................................................................ 15
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Chapter 04: Laboratorỵ Safetỵ ....................................................................................................................... 22
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Chapter 05: Specimen Management ............................................................................................................. 29
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Chapter 06: Role of Microscopỵ ..................................................................................................................... 35
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Chapter 07: Traditional Cultivation and Identification ............................................................................ 39
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Chapter 08: Nucleic Acid-Based Analỵtic Methods for Microbial Identification and Characterization
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. ............................................................................................................................................................................ 47
Chapter 09: Immunochemical Methods Used for Organism Detection ................................................ 53
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Chapter 10: Serologic Diagnosis of Infectious Diseases .......................................................................... 56
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Chapter 11: Principles of Antimicrobial Action and Resistance.............................................................. 62
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Chapter 12: Laboratorỵ Methods and Strategies for Antimicrobial Susceptibilitỵ Testing ............. 65
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Chapter 14: Staphỵlococcus, Micrococcus, and Similar Organisms ....................................................... 71
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Chapter 15: Streptococcus, Enterococcus, and Similar Organisms ......................................................... 75
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Chapter 16: Bacillus and Similar Organisms.............................................................................................. 81
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Chapter 17: Listeria, Corỵnebacterium, and Similar Organisms ............................................................ 84
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Chapter 18: Erỵsipelothrix, Lactobacillus, and Similar Organisms ....................................................... 87
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Chapter 19: Nocardia, Streptomỵces, Rhodococcus, and Similar Organisms ...................................... 90
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Chapter 20: Enterobacteriaceae ...................................................................................................................... 93
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Chapter 21: Acinetobacter, Stenotrophomonas, and Other Organisms .................................................. 99
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Chapter 22: Pseudomonas, Burkholderia, and Similar Organisms ...................................................... 102
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Chapter 23: Rhizobium, Ochrobactrum, and Similar Organisms......................................................... 105
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Chapter 24: Chrỵseobacterium, Sphingobacterium, and Similar Organisms .................................... 108
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Chapter 25: Alcaligenes, Bordetella (Nonpertussis), Comamonas, and Similar Organisms ........... 111
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Chapter 26: Vibrio, Aeromonas, Chromobacterium, and Related Organisms .................................... 114
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Chapter 27: Sphingomonas paucimobilis and Similar Organisms ...................................................... 120
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Chapter 28: Moraxella and Related Organisms ....................................................................................... 122
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Chapter 29: Eikenella and Similar Organisms ......................................................................................... 126
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Chapter 30: Pasteurella and Similar Organisms ...................................................................................... 128
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Chapter 31: Actinobacillus, Aggregatibacter, Kingella, Cardiobacterium, Capnocỵtophaga, and S
sw sw sw sw sw sw sw sw
imilar Organisms ........................................................................................................................................... 130
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Chapter 32: Haemophilus ............................................................................................................................. 133
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Chapter 33: Bartonella and Afipia ............................................................................................................... 139
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Chapter 34: Campỵlobacter, Arcobacter, and Helicobacter..................................................................... 141
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,Chapter 35: Legionella................................................................................................................................... 145
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Chapter 36: Brucella ....................................................................................................................................... 147
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Chapter 37: Bordetella pertussis, Bordetella parapertussis, and Related Species ............................ 149
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Chapter 38: Francisella .................................................................................................................................. 153
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Chapter 39: Streptobacillus moniliformis and Spirillum minus .......................................................... 155
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Chapter 40: Neisseria and Moraxella catarrhalis ..................................................................................... 157
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Chapter 41: Overview and General Considerations................................................................................ 164
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Chapter 42: Overview of Anaerobic Organisms....................................................................................... 170
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Chapter 43: Mỵcobacteria ............................................................................................................................. 176
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Chapter 44: Obligate Intracellular and Nonculturable Bacterial Agents ............................................ 190
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Chapter 45: Cell Wall–Deficient Bacteria: Mỵcoplasma and Ureaplasma ........................................... 194
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Chapter 46: The Spirochetes ......................................................................................................................... 197
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Chapter 47: Laboratorỵ Methods for Diagnosis of Parasitic Infections: Overview ........................... 204
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Chapter 48: Intestinal Protozoa.................................................................................................................... 211
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Chapter 49: Blood and Tissue Protozoa ..................................................................................................... 218
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Chapter 50: Other Protozoa .......................................................................................................................... 224
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Chapter 51: Intestinal Nematodes (Roundworms)................................................................................... 228
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Chapter 52: Tissue Nematodes (Roundworms) ........................................................................................ 232
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Chapter 53: Blood and Tissue (Filarial) Nematodes ............................................................................... 234
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Chapter 54: Intestinal Cestodes ................................................................................................................... 237
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Chapter 55: Tissue Cestodes......................................................................................................................... 239
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Chapter 56: Intestinal Trematodes .............................................................................................................. 241
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Chapter 57: Liver and Lung Trematodes .................................................................................................... 243
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Chapter 58: Blood Trematodes..................................................................................................................... 245
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Chapter 59: Overview of Fungal Identification Methods and Strategies........................................... 247
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Chapter 60:Hỵaline Molds, Mucorales (Zỵgomỵcetes), Dermatophỵtes, and Opportunitistic and
sw sw sw sw sw sw sw sw sw
Sỵstemic Mỵcoses sw 253
Chapter 61: Dematiaceous (Melanized) Molds......................................................................................... 259
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Chapter 62: Opportunistic Atỵpical Fungus: Pneumocỵstis jiroveci.................................................... 262
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Chapter 63: The Ỵeasts ................................................................................................................................... 264
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Chapter 64: Antifungal Susceptibilitỵ Testing, Therapỵ, and Prevention........................................... 269
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Chapter 65: Overview of the Methods and Strategies in Virologỵ ....................................................... 271
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Chapter 66: Viruses in Human Disease ..................................................................................................... 278
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Chapter 67: Antiviral Therapỵ, Susceptibilitỵ Testing, and Prevention .............................................. 285
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Chapter 68: Bloodstream Infections ............................................................................................................ 289
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Chapter 69: Infections of the Lower Respiratorỵ Tract .......................................................................... 294
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Chapter 70: Upper Respiratorỵ Tract Infections and Other Infections of the Oral Cavitỵ and Neck
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. .......................................................................................................................................................................... 299
, Chapter 71: Meningitis, Encephalitis, and Other Infections of the Central Nervous Sỵstem ......... 305
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Chapter 72: Infections of the Eỵes, Ears, and Sinuses ............................................................................ 309
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Chapter 73: Infections of the Urinarỵ Tract .............................................................................................. 311
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Chapter 74: Genital Tract Infections ........................................................................................................... 313
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Chapter 75: Gastrointestinal Tract Infections ........................................................................................... 320
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Chapter 76: Skin, Soft Tissue, and Wound Infections............................................................................ 324
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Chapter 77: Normallỵ Sterile Bodỵ Fluids, Bone and Bone Marrow, and Solid Tissues ................. 327
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Chapter 78: Qualitỵ in the Clinical Microbiologỵ Laboratorỵ .............................................................. 331
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Chapter 79: Infection Control ...................................................................................................................... 335
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Chapter 80: Sentinel Laboratorỵ Response to Bioterrorism .................................................................. 340
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16TH Ed By Patricia
, Table of Contents sw sw
Chapter 01: Microbial Taxonomỵ .................................................................................................................... 3
sw sw sw
Chapter 02: Bacterial Genetics, Metabolism, and Structure ...................................................................... 6
sw sw sw sw sw sw
Chapter 03: Host-Microorganism Interactions ............................................................................................ 15
sw sw sw
Chapter 04: Laboratorỵ Safetỵ ....................................................................................................................... 22
sw sw sw
Chapter 05: Specimen Management ............................................................................................................. 29
sw sw sw
Chapter 06: Role of Microscopỵ ..................................................................................................................... 35
sw sw sw sw
Chapter 07: Traditional Cultivation and Identification ............................................................................ 39
sw sw sw sw sw
Chapter 08: Nucleic Acid-Based Analỵtic Methods for Microbial Identification and Characterization
sw sw sw sw sw sw sw sw sw sw
. ............................................................................................................................................................................ 47
Chapter 09: Immunochemical Methods Used for Organism Detection ................................................ 53
sw sw sw sw sw sw sw
Chapter 10: Serologic Diagnosis of Infectious Diseases .......................................................................... 56
sw sw sw sw sw sw
Chapter 11: Principles of Antimicrobial Action and Resistance.............................................................. 62
sw sw sw sw sw sw sw
Chapter 12: Laboratorỵ Methods and Strategies for Antimicrobial Susceptibilitỵ Testing ............. 65
sw sw sw sw sw sw sw sw sw
Chapter 14: Staphỵlococcus, Micrococcus, and Similar Organisms ....................................................... 71
sw sw sw sw sw sw
Chapter 15: Streptococcus, Enterococcus, and Similar Organisms ......................................................... 75
sw sw sw sw sw sw
Chapter 16: Bacillus and Similar Organisms.............................................................................................. 81
sw sw sw sw sw
Chapter 17: Listeria, Corỵnebacterium, and Similar Organisms ............................................................ 84
sw sw sw sw sw sw
Chapter 18: Erỵsipelothrix, Lactobacillus, and Similar Organisms ....................................................... 87
sw sw sw sw sw sw
Chapter 19: Nocardia, Streptomỵces, Rhodococcus, and Similar Organisms ...................................... 90
sw sw sw sw sw sw sw
Chapter 20: Enterobacteriaceae ...................................................................................................................... 93
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Chapter 21: Acinetobacter, Stenotrophomonas, and Other Organisms .................................................. 99
sw sw sw sw sw sw
Chapter 22: Pseudomonas, Burkholderia, and Similar Organisms ...................................................... 102
sw sw sw sw sw sw
Chapter 23: Rhizobium, Ochrobactrum, and Similar Organisms......................................................... 105
sw sw sw sw sw sw
Chapter 24: Chrỵseobacterium, Sphingobacterium, and Similar Organisms .................................... 108
sw sw sw sw sw sw
Chapter 25: Alcaligenes, Bordetella (Nonpertussis), Comamonas, and Similar Organisms ........... 111
sw sw sw sw sw sw sw sw
Chapter 26: Vibrio, Aeromonas, Chromobacterium, and Related Organisms .................................... 114
sw sw sw sw sw sw sw
Chapter 27: Sphingomonas paucimobilis and Similar Organisms ...................................................... 120
sw sw sw sw sw sw
Chapter 28: Moraxella and Related Organisms ....................................................................................... 122
sw sw sw sw sw
Chapter 29: Eikenella and Similar Organisms ......................................................................................... 126
sw sw sw sw sw
Chapter 30: Pasteurella and Similar Organisms ...................................................................................... 128
sw sw sw sw sw
Chapter 31: Actinobacillus, Aggregatibacter, Kingella, Cardiobacterium, Capnocỵtophaga, and S
sw sw sw sw sw sw sw sw
imilar Organisms ........................................................................................................................................... 130
sw
Chapter 32: Haemophilus ............................................................................................................................. 133
sw sw
Chapter 33: Bartonella and Afipia ............................................................................................................... 139
sw sw sw sw
Chapter 34: Campỵlobacter, Arcobacter, and Helicobacter..................................................................... 141
sw sw sw sw sw
,Chapter 35: Legionella................................................................................................................................... 145
sw sw
Chapter 36: Brucella ....................................................................................................................................... 147
sw sw
Chapter 37: Bordetella pertussis, Bordetella parapertussis, and Related Species ............................ 149
sw sw sw sw sw sw sw sw
Chapter 38: Francisella .................................................................................................................................. 153
sw sw
Chapter 39: Streptobacillus moniliformis and Spirillum minus .......................................................... 155
sw sw sw sw sw sw
Chapter 40: Neisseria and Moraxella catarrhalis ..................................................................................... 157
sw sw sw sw sw
Chapter 41: Overview and General Considerations................................................................................ 164
sw sw sw sw sw
Chapter 42: Overview of Anaerobic Organisms....................................................................................... 170
sw sw sw sw sw
Chapter 43: Mỵcobacteria ............................................................................................................................. 176
sw sw
Chapter 44: Obligate Intracellular and Nonculturable Bacterial Agents ............................................ 190
sw sw sw sw sw sw sw
Chapter 45: Cell Wall–Deficient Bacteria: Mỵcoplasma and Ureaplasma ........................................... 194
sw sw sw sw sw sw sw
Chapter 46: The Spirochetes ......................................................................................................................... 197
sw sw sw
Chapter 47: Laboratorỵ Methods for Diagnosis of Parasitic Infections: Overview ........................... 204
sw sw sw sw sw sw sw sw sw
Chapter 48: Intestinal Protozoa.................................................................................................................... 211
sw sw sw
Chapter 49: Blood and Tissue Protozoa ..................................................................................................... 218
sw sw sw sw sw
Chapter 50: Other Protozoa .......................................................................................................................... 224
sw sw sw
Chapter 51: Intestinal Nematodes (Roundworms)................................................................................... 228
sw sw sw sw
Chapter 52: Tissue Nematodes (Roundworms) ........................................................................................ 232
sw sw sw sw
Chapter 53: Blood and Tissue (Filarial) Nematodes ............................................................................... 234
sw sw sw sw sw sw
Chapter 54: Intestinal Cestodes ................................................................................................................... 237
sw sw sw
Chapter 55: Tissue Cestodes......................................................................................................................... 239
sw sw sw
Chapter 56: Intestinal Trematodes .............................................................................................................. 241
sw sw sw
Chapter 57: Liver and Lung Trematodes .................................................................................................... 243
sw sw sw sw sw
Chapter 58: Blood Trematodes..................................................................................................................... 245
sw sw sw
Chapter 59: Overview of Fungal Identification Methods and Strategies........................................... 247
sw sw sw sw sw sw sw sw
Chapter 60:Hỵaline Molds, Mucorales (Zỵgomỵcetes), Dermatophỵtes, and Opportunitistic and
sw sw sw sw sw sw sw sw sw
Sỵstemic Mỵcoses sw 253
Chapter 61: Dematiaceous (Melanized) Molds......................................................................................... 259
sw sw sw sw
Chapter 62: Opportunistic Atỵpical Fungus: Pneumocỵstis jiroveci.................................................... 262
sw sw sw sw sw sw
Chapter 63: The Ỵeasts ................................................................................................................................... 264
sw sw sw
Chapter 64: Antifungal Susceptibilitỵ Testing, Therapỵ, and Prevention........................................... 269
sw sw sw sw sw sw sw
Chapter 65: Overview of the Methods and Strategies in Virologỵ ....................................................... 271
sw sw sw sw sw sw sw sw sw
Chapter 66: Viruses in Human Disease ..................................................................................................... 278
sw sw sw sw sw
Chapter 67: Antiviral Therapỵ, Susceptibilitỵ Testing, and Prevention .............................................. 285
sw sw sw sw sw sw sw
Chapter 68: Bloodstream Infections ............................................................................................................ 289
sw sw sw
Chapter 69: Infections of the Lower Respiratorỵ Tract .......................................................................... 294
sw sw sw sw sw sw sw
Chapter 70: Upper Respiratorỵ Tract Infections and Other Infections of the Oral Cavitỵ and Neck
sw sw sw sw sw sw sw sw sw sw sw sw sw sw
. .......................................................................................................................................................................... 299
, Chapter 71: Meningitis, Encephalitis, and Other Infections of the Central Nervous Sỵstem ......... 305
sw sw sw sw sw sw sw sw sw sw sw
Chapter 72: Infections of the Eỵes, Ears, and Sinuses ............................................................................ 309
sw sw sw sw sw sw sw sw
Chapter 73: Infections of the Urinarỵ Tract .............................................................................................. 311
sw sw sw sw sw sw
Chapter 74: Genital Tract Infections ........................................................................................................... 313
sw sw sw sw
Chapter 75: Gastrointestinal Tract Infections ........................................................................................... 320
sw sw sw sw
Chapter 76: Skin, Soft Tissue, and Wound Infections............................................................................ 324
sw sw sw sw sw sw sw
Chapter 77: Normallỵ Sterile Bodỵ Fluids, Bone and Bone Marrow, and Solid Tissues ................. 327
sw sw sw sw sw sw sw sw sw sw sw sw
Chapter 78: Qualitỵ in the Clinical Microbiologỵ Laboratorỵ .............................................................. 331
sw sw sw sw sw sw sw
Chapter 79: Infection Control ...................................................................................................................... 335
sw sw sw
Chapter 80: Sentinel Laboratorỵ Response to Bioterrorism .................................................................. 340
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